Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AC006557.6-201ENST00000623071 864 ntBASIC14.31□□□□□ -0.12
RAB5CP51148 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5CP51148 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5CP51148 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5CP51148 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 TCAF2P1-201ENST00000291129 2421 ntBASIC14.3□□□□□ -0.12
RAB5CP51148 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB5CP51148 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 KRT18P61-201ENST00000585825 1298 ntBASIC14.3□□□□□ -0.12
RAB5CP51148 AC110285.6-201ENST00000617652 491 ntBASIC14.3□□□□□ -0.12
RAB5CP51148 AL121829.2-201ENST00000620908 328 ntBASIC14.3□□□□□ -0.12
RAB5CP51148 LINC01451-201ENST00000623792 534 ntBASIC14.3□□□□□ -0.12
RAB5CP51148 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB5CP51148 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB5CP51148 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB5CP51148 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB5CP51148 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5CP51148 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
RAB5CP51148 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5CP51148 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5CP51148 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5CP51148 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB5CP51148 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5CP51148 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5CP51148 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5CP51148 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB5CP51148 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5CP51148 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB5CP51148 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5CP51148 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
RAB5CP51148 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5CP51148 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms