Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK7P50613 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDK7P50613 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK7P50613 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK7P50613 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK7P50613 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.56■□□□□ 0.72
CDK7P50613 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
CDK7P50613 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK7P50613 AC004790.2-201ENST00000623588 572 ntBASIC19.56■□□□□ 0.72
CDK7P50613 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDK7P50613 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDK7P50613 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 AL049757.1-201ENST00000616842 1596 ntBASIC19.56■□□□□ 0.72
CDK7P50613 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK7P50613 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK7P50613 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK7P50613 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 AC132938.5-201ENST00000624980 1813 ntBASIC19.55■□□□□ 0.72
CDK7P50613 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK7P50613 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDK7P50613 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 RPS15P9-201ENST00000494093 319 ntBASIC19.55■□□□□ 0.72
CDK7P50613 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.55■□□□□ 0.72
CDK7P50613 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 MIR4751-201ENST00000578027 74 ntBASIC19.55■□□□□ 0.72
CDK7P50613 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.55■□□□□ 0.72
CDK7P50613 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDK7P50613 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDK7P50613 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK7P50613 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK7P50613 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 GPR89P-201ENST00000407924 1495 ntBASIC19.54■□□□□ 0.72
CDK7P50613 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK7P50613 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDK7P50613 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK7P50613 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK7P50613 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.54■□□□□ 0.72
CDK7P50613 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK7P50613 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.54■□□□□ 0.72
CDK7P50613 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDK7P50613 AL078644.1-201ENST00000609881 752 ntBASIC19.54■□□□□ 0.72
CDK7P50613 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK7P50613 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 AC148477.5-201ENST00000625164 1645 ntBASIC19.54■□□□□ 0.72
CDK7P50613 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK7P50613 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.53■□□□□ 0.72
CDK7P50613 NCF1C-201ENST00000438382 1427 ntBASIC19.53■□□□□ 0.72
CDK7P50613 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 ESPNP-201ENST00000270691 2015 ntBASIC19.53■□□□□ 0.72
CDK7P50613 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDK7P50613 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDK7P50613 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms