Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 MIR497HG-202ENST00000572453 3838 ntBASIC12.16□□□□□ -0.46
PCP4P48539 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.16□□□□□ -0.46
PCP4P48539 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PCP4P48539 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PCP4P48539 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PCP4P48539 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PCP4P48539 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PCP4P48539 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PCP4P48539 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.15□□□□□ -0.46
PCP4P48539 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PCP4P48539 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
PCP4P48539 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PCP4P48539 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
PCP4P48539 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 AC022532.1-201ENST00000624563 1728 ntBASIC12.14□□□□□ -0.47
PCP4P48539 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 LSINCT5-201ENST00000626215 2647 ntBASIC12.14□□□□□ -0.47
PCP4P48539 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PCP4P48539 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 MEX3B-202ENST00000558133 4333 ntBASIC12.14□□□□□ -0.47
PCP4P48539 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PCP4P48539 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.14□□□□□ -0.47
PCP4P48539 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PCP4P48539 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PCP4P48539 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PCP4P48539 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms