Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHRNA4P43681 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA4P43681 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CHRNA4P43681 DDX43P3-201ENST00000441064 443 ntBASIC17.92■□□□□ 0.46
CHRNA4P43681 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.92■□□□□ 0.46
CHRNA4P43681 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 AP005901.3-202ENST00000581653 237 ntBASIC17.92■□□□□ 0.46
CHRNA4P43681 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 AL353801.3-201ENST00000609898 542 ntBASIC17.92■□□□□ 0.46
CHRNA4P43681 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA4P43681 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHRNA4P43681 AC106820.2-201ENST00000563775 3264 ntBASIC17.92■□□□□ 0.46
CHRNA4P43681 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA4P43681 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA4P43681 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA4P43681 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA4P43681 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CHRNA4P43681 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRNA4P43681 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 KRT18P1-202ENST00000452408 1331 ntBASIC17.91■□□□□ 0.46
CHRNA4P43681 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA4P43681 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA4P43681 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA4P43681 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHRNA4P43681 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA4P43681 AC011840.4-201ENST00000578471 627 ntBASIC17.9■□□□□ 0.46
CHRNA4P43681 AP002414.4-201ENST00000589764 1148 ntBASIC17.9■□□□□ 0.46
CHRNA4P43681 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA4P43681 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA4P43681 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA4P43681 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.89■□□□□ 0.46
CHRNA4P43681 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.89■□□□□ 0.46
CHRNA4P43681 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA4P43681 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA4P43681 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA4P43681 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.89■□□□□ 0.46
CHRNA4P43681 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA4P43681 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA4P43681 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA4P43681 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA4P43681 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA4P43681 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA4P43681 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHRNA4P43681 AC139713.2-201ENST00000641328 2723 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms