Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLC1A1P43005 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC1A1P43005 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC1A1P43005 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 HBZP1-201ENST00000354915 429 ntBASIC18.59■□□□□ 0.57
SLC1A1P43005 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.59■□□□□ 0.57
SLC1A1P43005 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 MTCL1P1-201ENST00000446207 792 ntBASIC18.59■□□□□ 0.57
SLC1A1P43005 AC068472.1-201ENST00000474589 881 ntBASIC18.59■□□□□ 0.57
SLC1A1P43005 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC1A1P43005 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.59■□□□□ 0.57
SLC1A1P43005 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC1A1P43005 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC1A1P43005 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC1A1P43005 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC1A1P43005 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SLC1A1P43005 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC1A1P43005 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 AC016396.2-201ENST00000562575 1417 ntBASIC18.58■□□□□ 0.57
SLC1A1P43005 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC1A1P43005 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SLC1A1P43005 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC1A1P43005 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 AC005521.1-201ENST00000393351 872 ntBASIC18.58■□□□□ 0.56
SLC1A1P43005 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC1A1P43005 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SLC1A1P43005 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC1A1P43005 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC1A1P43005 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC1A1P43005 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC1A1P43005 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SLC1A1P43005 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC1A1P43005 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 AC096633.1-201ENST00000422446 749 ntBASIC18.57■□□□□ 0.56
SLC1A1P43005 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC1A1P43005 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC1A1P43005 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms