Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.01□□□□□ -0.49
CXCL5P42830 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.01□□□□□ -0.49
CXCL5P42830 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL5P42830 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL5P42830 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.01□□□□□ -0.49
CXCL5P42830 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.01□□□□□ -0.49
CXCL5P42830 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL5P42830 AC073648.6-201ENST00000641589 218 ntBASIC12.01□□□□□ -0.49
CXCL5P42830 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL5P42830 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL5P42830 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL5P42830 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CXCL5P42830 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL5P42830 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL5P42830 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL5P42830 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12□□□□□ -0.49
CXCL5P42830 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12□□□□□ -0.49
CXCL5P42830 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12□□□□□ -0.49
CXCL5P42830 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12□□□□□ -0.49
CXCL5P42830 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12□□□□□ -0.49
CXCL5P42830 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12□□□□□ -0.49
CXCL5P42830 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 AC080080.1-201ENST00000625121 2420 ntBASIC12□□□□□ -0.49
CXCL5P42830 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12□□□□□ -0.49
CXCL5P42830 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12□□□□□ -0.49
CXCL5P42830 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL5P42830 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 AC068418.2-201ENST00000577309 3703 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms