Protein–RNA interactions for Protein: P40616

ARL1, ADP-ribosylation factor-like protein 1, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1P40616 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.61■□□□□ 0.41
ARL1P40616 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.61■□□□□ 0.41
ARL1P40616 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ARL1P40616 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.61■□□□□ 0.41
ARL1P40616 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
ARL1P40616 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.61■□□□□ 0.41
ARL1P40616 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARL1P40616 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ARL1P40616 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.6■□□□□ 0.41
ARL1P40616 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.6■□□□□ 0.41
ARL1P40616 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARL1P40616 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ARL1P40616 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ARL1P40616 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ARL1P40616 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.59■□□□□ 0.41
ARL1P40616 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 LIN28AP1-201ENST00000429574 405 ntBASIC17.59■□□□□ 0.41
ARL1P40616 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.59■□□□□ 0.41
ARL1P40616 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.59■□□□□ 0.41
ARL1P40616 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARL1P40616 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ARL1P40616 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARL1P40616 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARL1P40616 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARL1P40616 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARL1P40616 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ARL1P40616 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ARL1P40616 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.58■□□□□ 0.41
ARL1P40616 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.58■□□□□ 0.41
ARL1P40616 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ARL1P40616 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.58■□□□□ 0.41
ARL1P40616 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARL1P40616 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.58■□□□□ 0.4
ARL1P40616 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.58■□□□□ 0.4
ARL1P40616 ATP5G1P1-201ENST00000448724 379 ntBASIC17.58■□□□□ 0.4
ARL1P40616 NEK4P2-201ENST00000580004 1012 ntBASIC17.58■□□□□ 0.4
ARL1P40616 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ARL1P40616 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARL1P40616 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.58■□□□□ 0.4
ARL1P40616 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARL1P40616 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARL1P40616 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ARL1P40616 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARL1P40616 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms