Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 LINC00896-202ENST00000609602 2128 ntBASIC18.73■□□□□ 0.59
PCK1P35558 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 AC022616.7-201ENST00000525383 220 ntBASIC18.73■□□□□ 0.59
PCK1P35558 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.73■□□□□ 0.59
PCK1P35558 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.73■□□□□ 0.59
PCK1P35558 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 LINC01311-201ENST00000565162 1445 ntBASIC18.73■□□□□ 0.59
PCK1P35558 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.73■□□□□ 0.59
PCK1P35558 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.73■□□□□ 0.59
PCK1P35558 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCK1P35558 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.73■□□□□ 0.59
PCK1P35558 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCK1P35558 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.72■□□□□ 0.59
PCK1P35558 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
PCK1P35558 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.72■□□□□ 0.59
PCK1P35558 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCK1P35558 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCK1P35558 DUX4L26-201ENST00000489078 1255 ntBASIC18.72■□□□□ 0.59
PCK1P35558 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.72■□□□□ 0.59
PCK1P35558 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCK1P35558 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCK1P35558 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PCK1P35558 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.71■□□□□ 0.59
PCK1P35558 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.71■□□□□ 0.59
PCK1P35558 TSPY12P-201ENST00000421279 868 ntBASIC18.71■□□□□ 0.59
PCK1P35558 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.71■□□□□ 0.59
PCK1P35558 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 VENTXP5-201ENST00000523979 775 ntBASIC18.71■□□□□ 0.59
PCK1P35558 LINC01238-205ENST00000567549 1107 ntBASIC18.71■□□□□ 0.59
PCK1P35558 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.71■□□□□ 0.59
PCK1P35558 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.71■□□□□ 0.59
PCK1P35558 GPR32P1-201ENST00000601788 811 ntBASIC18.71■□□□□ 0.59
PCK1P35558 AC116407.2-201ENST00000613639 860 ntBASIC18.71■□□□□ 0.59
PCK1P35558 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.71■□□□□ 0.59
PCK1P35558 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCK1P35558 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.71■□□□□ 0.59
PCK1P35558 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCK1P35558 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCK1P35558 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.7■□□□□ 0.58
PCK1P35558 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCK1P35558 AL353692.3-201ENST00000407031 1396 ntBASIC18.7■□□□□ 0.58
PCK1P35558 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCK1P35558 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCK1P35558 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.7■□□□□ 0.58
PCK1P35558 TMPOP1-202ENST00000424642 1267 ntBASIC18.7■□□□□ 0.58
PCK1P35558 SPDYE13P-201ENST00000445314 798 ntBASIC18.7■□□□□ 0.58
PCK1P35558 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms