Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCN1P35523 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCN1P35523 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLCN1P35523 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN1P35523 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 AC116562.2-201ENST00000507042 360 ntBASIC20.23■□□□□ 0.83
CLCN1P35523 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN1P35523 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCN1P35523 CKBP1-201ENST00000565489 1086 ntBASIC20.23■□□□□ 0.83
CLCN1P35523 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.23■□□□□ 0.83
CLCN1P35523 TMEM191A-211ENST00000637163 1067 ntBASIC20.23■□□□□ 0.83
CLCN1P35523 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 AC006449.5-201ENST00000610658 2098 ntBASIC20.23■□□□□ 0.83
CLCN1P35523 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN1P35523 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLCN1P35523 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN1P35523 AC024909.3-201ENST00000611513 2257 ntBASIC20.23■□□□□ 0.83
CLCN1P35523 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN1P35523 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.22■□□□□ 0.83
CLCN1P35523 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CLCN1P35523 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLCN1P35523 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCN1P35523 AC012618.2-201ENST00000428058 849 ntBASIC20.22■□□□□ 0.83
CLCN1P35523 FAM207BP-201ENST00000447172 505 ntBASIC20.22■□□□□ 0.83
CLCN1P35523 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 AL049637.2-201ENST00000641778 930 ntBASIC20.22■□□□□ 0.83
CLCN1P35523 FSCN1P1-201ENST00000568912 1481 ntBASIC20.22■□□□□ 0.83
CLCN1P35523 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CLCN1P35523 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN1P35523 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN1P35523 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN1P35523 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLCN1P35523 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN1P35523 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.21■□□□□ 0.83
CLCN1P35523 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCN1P35523 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCN1P35523 AP000692.2-201ENST00000608391 879 ntBASIC20.21■□□□□ 0.83
CLCN1P35523 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN1P35523 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCN1P35523 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN1P35523 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLCN1P35523 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms