Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RORAP35398 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.86■□□□□ 0.29
RORAP35398 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 FAM220CP-201ENST00000395253 831 ntBASIC16.86■□□□□ 0.29
RORAP35398 AC096633.1-201ENST00000422446 749 ntBASIC16.86■□□□□ 0.29
RORAP35398 AC007967.3-201ENST00000434308 558 ntBASIC16.86■□□□□ 0.29
RORAP35398 SCARNA2-201ENST00000458748 420 ntBASIC16.86■□□□□ 0.29
RORAP35398 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RORAP35398 RNPS1P1-201ENST00000507437 918 ntBASIC16.86■□□□□ 0.29
RORAP35398 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.86■□□□□ 0.29
RORAP35398 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.86■□□□□ 0.29
RORAP35398 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 BICD1-207ENST00000551848 1962 ntBASIC16.86■□□□□ 0.29
RORAP35398 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RORAP35398 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 LTB4R2-202ENST00000528054 3092 ntBASIC16.85■□□□□ 0.29
RORAP35398 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.85■□□□□ 0.29
RORAP35398 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 AL590627.1-203ENST00000421194 1026 ntBASIC16.85■□□□□ 0.29
RORAP35398 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.85■□□□□ 0.29
RORAP35398 AC073648.2-201ENST00000510116 352 ntBASIC16.85■□□□□ 0.29
RORAP35398 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 AC120114.3-201ENST00000611923 658 ntBASIC16.85■□□□□ 0.29
RORAP35398 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 KRT8P47-201ENST00000604727 1398 ntBASIC16.85■□□□□ 0.29
RORAP35398 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.85■□□□□ 0.29
RORAP35398 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RORAP35398 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RORAP35398 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RORAP35398 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RORAP35398 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
RORAP35398 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.84■□□□□ 0.29
RORAP35398 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RORAP35398 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 AL096828.2-201ENST00000567259 1965 ntBASIC16.84■□□□□ 0.29
RORAP35398 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.84■□□□□ 0.29
RORAP35398 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms