Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MMP8P22894 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP8P22894 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP8P22894 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
MMP8P22894 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MMP8P22894 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP8P22894 AP002383.4-201ENST00000442518 975 ntBASIC18.66■□□□□ 0.58
MMP8P22894 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP8P22894 AC091607.1-201ENST00000490318 1060 ntBASIC18.66■□□□□ 0.58
MMP8P22894 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP8P22894 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP8P22894 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP8P22894 AP000550.4-202ENST00000639755 178 ntBASIC18.66■□□□□ 0.58
MMP8P22894 AC108860.2-201ENST00000562760 2183 ntBASIC18.66■□□□□ 0.58
MMP8P22894 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MMP8P22894 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP8P22894 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP8P22894 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP8P22894 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.65■□□□□ 0.58
MMP8P22894 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MMP8P22894 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MMP8P22894 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
MMP8P22894 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
MMP8P22894 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MMP8P22894 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.65■□□□□ 0.58
MMP8P22894 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MMP8P22894 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.65■□□□□ 0.58
MMP8P22894 AP005901.3-202ENST00000581653 237 ntBASIC18.65■□□□□ 0.58
MMP8P22894 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP8P22894 AL445228.2-201ENST00000605589 952 ntBASIC18.65■□□□□ 0.58
MMP8P22894 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.65■□□□□ 0.58
MMP8P22894 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP8P22894 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.64■□□□□ 0.58
MMP8P22894 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
MMP8P22894 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP8P22894 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
MMP8P22894 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
MMP8P22894 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 CROCCP2-202ENST00000412962 2773 ntBASIC18.64■□□□□ 0.57
MMP8P22894 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MMP8P22894 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP8P22894 DRAXINP1-201ENST00000437611 948 ntBASIC18.64■□□□□ 0.57
MMP8P22894 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP8P22894 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP8P22894 AC002558.1-201ENST00000488906 803 ntBASIC18.64■□□□□ 0.57
MMP8P22894 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP8P22894 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP8P22894 AL358472.4-201ENST00000633140 710 ntBASIC18.64■□□□□ 0.57
MMP8P22894 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP8P22894 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP8P22894 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP8P22894 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP8P22894 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms