Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.07■□□□□ 0.48
NFKB1P19838 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.07■□□□□ 0.48
NFKB1P19838 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.07■□□□□ 0.48
NFKB1P19838 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NFKB1P19838 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NFKB1P19838 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NFKB1P19838 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
NFKB1P19838 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NFKB1P19838 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NFKB1P19838 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.06■□□□□ 0.48
NFKB1P19838 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 AL845331.1-201ENST00000424978 1190 ntBASIC18.06■□□□□ 0.48
NFKB1P19838 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 AC090616.6-201ENST00000582640 721 ntBASIC18.06■□□□□ 0.48
NFKB1P19838 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.06■□□□□ 0.48
NFKB1P19838 IGHV3-41-201ENST00000613121 348 ntBASIC18.06■□□□□ 0.48
NFKB1P19838 AC116407.4-201ENST00000623319 1061 ntBASIC18.06■□□□□ 0.48
NFKB1P19838 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.06■□□□□ 0.48
NFKB1P19838 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NFKB1P19838 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
NFKB1P19838 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NFKB1P19838 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.06■□□□□ 0.48
NFKB1P19838 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
NFKB1P19838 HLA-J-201ENST00000462773 1622 ntBASIC18.05■□□□□ 0.48
NFKB1P19838 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 BX276092.7-203ENST00000637198 1536 ntBASIC18.05■□□□□ 0.48
NFKB1P19838 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 PCED1CP-201ENST00000419887 785 ntBASIC18.05■□□□□ 0.48
NFKB1P19838 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
NFKB1P19838 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NFKB1P19838 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NFKB1P19838 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 AC139713.2-201ENST00000641328 2723 ntBASIC18.04■□□□□ 0.48
NFKB1P19838 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.04■□□□□ 0.48
NFKB1P19838 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NFKB1P19838 AC096633.1-201ENST00000422446 749 ntBASIC18.04■□□□□ 0.48
NFKB1P19838 BX276092.5-203ENST00000456199 560 ntBASIC18.04■□□□□ 0.48
NFKB1P19838 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.04■□□□□ 0.48
NFKB1P19838 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.04■□□□□ 0.48
NFKB1P19838 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.04■□□□□ 0.48
NFKB1P19838 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NFKB1P19838 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms