Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.48■□□□□ 0.23
PRKCAP17252 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
PRKCAP17252 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.48■□□□□ 0.23
PRKCAP17252 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.48■□□□□ 0.23
PRKCAP17252 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PRKCAP17252 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRKCAP17252 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 AL031133.1-201ENST00000406807 723 ntBASIC16.47■□□□□ 0.23
PRKCAP17252 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.47■□□□□ 0.23
PRKCAP17252 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRKCAP17252 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.47■□□□□ 0.23
PRKCAP17252 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRKCAP17252 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRKCAP17252 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.46■□□□□ 0.23
PRKCAP17252 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.46■□□□□ 0.23
PRKCAP17252 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.46■□□□□ 0.23
PRKCAP17252 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRKCAP17252 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.46■□□□□ 0.23
PRKCAP17252 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.46■□□□□ 0.23
PRKCAP17252 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.46■□□□□ 0.23
PRKCAP17252 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRKCAP17252 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRKCAP17252 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.46■□□□□ 0.23
PRKCAP17252 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PRKCAP17252 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.46■□□□□ 0.23
PRKCAP17252 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRKCAP17252 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRKCAP17252 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRKCAP17252 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.46■□□□□ 0.22
PRKCAP17252 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
PRKCAP17252 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRKCAP17252 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms