Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SLC25A6P2-201ENST00000497974 877 ntBASIC21.52■■□□□ 1.04
COL11A2P13942 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
COL11A2P13942 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
COL11A2P13942 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.52■■□□□ 1.04
COL11A2P13942 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A2P13942 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A2P13942 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A2P13942 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL11A2P13942 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL11A2P13942 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
COL11A2P13942 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A2P13942 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
COL11A2P13942 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.52■■□□□ 1.03
COL11A2P13942 AC112191.1-201ENST00000523689 701 ntBASIC21.52■■□□□ 1.03
COL11A2P13942 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL11A2P13942 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.03
COL11A2P13942 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COL11A2P13942 AC051619.7-201ENST00000568314 623 ntBASIC21.52■■□□□ 1.03
COL11A2P13942 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
COL11A2P13942 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.51■■□□□ 1.03
COL11A2P13942 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.51■■□□□ 1.03
COL11A2P13942 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.51■■□□□ 1.03
COL11A2P13942 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.51■■□□□ 1.03
COL11A2P13942 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COL11A2P13942 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL11A2P13942 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.51■■□□□ 1.03
COL11A2P13942 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL11A2P13942 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.51■■□□□ 1.03
COL11A2P13942 AC107918.2-201ENST00000530817 355 ntBASIC21.51■■□□□ 1.03
COL11A2P13942 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.51■■□□□ 1.03
COL11A2P13942 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COL11A2P13942 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL11A2P13942 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
COL11A2P13942 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A2P13942 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
COL11A2P13942 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL11A2P13942 AL121761.2-201ENST00000598007 1648 ntBASIC21.5■■□□□ 1.03
COL11A2P13942 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.5■■□□□ 1.03
COL11A2P13942 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 GPS2P2-201ENST00000430745 888 ntBASIC21.5■■□□□ 1.03
COL11A2P13942 AC087641.1-201ENST00000557561 1021 ntBASIC21.5■■□□□ 1.03
COL11A2P13942 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.5■■□□□ 1.03
COL11A2P13942 MIR4745-201ENST00000577608 62 ntBASIC21.5■■□□□ 1.03
COL11A2P13942 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.5■■□□□ 1.03
COL11A2P13942 AL035252.4-201ENST00000624174 288 ntBASIC21.5■■□□□ 1.03
COL11A2P13942 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL11A2P13942 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A2P13942 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
COL11A2P13942 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.49■■□□□ 1.03
COL11A2P13942 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A2P13942 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL11A2P13942 AC002558.1-201ENST00000488906 803 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A2P13942 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A2P13942 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.49■■□□□ 1.03
COL11A2P13942 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 REXO1L3P-201ENST00000622202 1288 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 CROCCP3-202ENST00000420820 1947 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COL11A2P13942 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
COL11A2P13942 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.49■■□□□ 1.03
COL11A2P13942 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 SPDYE11-202ENST00000450699 704 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 AC067863.1-201ENST00000494933 530 ntBASIC21.49■■□□□ 1.03
COL11A2P13942 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.49■■□□□ 1.03
COL11A2P13942 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A2P13942 AL135744.1-201ENST00000565098 629 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms