Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 AC254562.1-201ENST00000417586 456 ntBASIC20.03■□□□□ 0.8
COL11A1P12107 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 PDPK2P-202ENST00000562415 1191 ntBASIC20.03■□□□□ 0.8
COL11A1P12107 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.03■□□□□ 0.8
COL11A1P12107 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL11A1P12107 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.03■□□□□ 0.8
COL11A1P12107 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A1P12107 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.03■□□□□ 0.8
COL11A1P12107 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A1P12107 AC138028.4-201ENST00000564984 1845 ntBASIC20.03■□□□□ 0.8
COL11A1P12107 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A1P12107 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A1P12107 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL11A1P12107 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A1P12107 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A1P12107 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A1P12107 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A1P12107 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COL11A1P12107 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL11A1P12107 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A1P12107 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A1P12107 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A1P12107 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A1P12107 FLJ13224-201ENST00000313737 1514 ntBASIC20.02■□□□□ 0.79
COL11A1P12107 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A1P12107 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A1P12107 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A1P12107 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.02■□□□□ 0.79
COL11A1P12107 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
COL11A1P12107 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.02■□□□□ 0.79
COL11A1P12107 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
COL11A1P12107 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.02■□□□□ 0.79
COL11A1P12107 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
COL11A1P12107 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A1P12107 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 LINC00304-203ENST00000565008 1864 ntBASIC20.01■□□□□ 0.79
COL11A1P12107 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A1P12107 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 YBX1P5-201ENST00000509441 847 ntBASIC20.01■□□□□ 0.79
COL11A1P12107 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 AL353135.1-201ENST00000606729 504 ntBASIC20.01■□□□□ 0.79
COL11A1P12107 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
COL11A1P12107 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COL11A1P12107 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A1P12107 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A1P12107 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A1P12107 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 RHOQP3-201ENST00000437982 621 ntBASIC20■□□□□ 0.79
COL11A1P12107 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 AC002558.1-201ENST00000488906 803 ntBASIC20■□□□□ 0.79
COL11A1P12107 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20■□□□□ 0.79
COL11A1P12107 KRT19P2-202ENST00000557173 1012 ntBASIC20■□□□□ 0.79
COL11A1P12107 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL11A1P12107 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL11A1P12107 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20■□□□□ 0.79
COL11A1P12107 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20■□□□□ 0.79
COL11A1P12107 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A1P12107 AC009113.1-201ENST00000570267 2443 ntBASIC20■□□□□ 0.79
COL11A1P12107 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
COL11A1P12107 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.99■□□□□ 0.79
COL11A1P12107 MKNK2P1-201ENST00000437526 628 ntBASIC19.99■□□□□ 0.79
COL11A1P12107 AC027796.2-201ENST00000575326 344 ntBASIC19.99■□□□□ 0.79
COL11A1P12107 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
COL11A1P12107 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A1P12107 ELL2P1-201ENST00000413990 1906 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms