Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.89□□□□□ -0.19
CD28P10747 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.89□□□□□ -0.19
CD28P10747 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 AC116407.3-201ENST00000623905 1129 ntBASIC13.89□□□□□ -0.19
CD28P10747 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CD28P10747 AL356309.3-201ENST00000624132 1934 ntBASIC13.89□□□□□ -0.19
CD28P10747 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.89□□□□□ -0.19
CD28P10747 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.88□□□□□ -0.19
CD28P10747 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 AC093503.3-201ENST00000624917 2352 ntBASIC13.88□□□□□ -0.19
CD28P10747 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CD28P10747 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 AC007967.3-201ENST00000434308 558 ntBASIC13.88□□□□□ -0.19
CD28P10747 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.88□□□□□ -0.19
CD28P10747 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 POLD2P1-201ENST00000511220 997 ntBASIC13.88□□□□□ -0.19
CD28P10747 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 KRT18P58-201ENST00000527480 1120 ntBASIC13.88□□□□□ -0.19
CD28P10747 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.88□□□□□ -0.19
CD28P10747 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 AC106730.1-201ENST00000566722 1090 ntBASIC13.88□□□□□ -0.19
CD28P10747 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CD28P10747 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.88□□□□□ -0.19
CD28P10747 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.88□□□□□ -0.19
CD28P10747 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CD28P10747 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD28P10747 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CD28P10747 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.87□□□□□ -0.19
CD28P10747 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 FAM220CP-201ENST00000395253 831 ntBASIC13.87□□□□□ -0.19
CD28P10747 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.87□□□□□ -0.19
CD28P10747 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.87□□□□□ -0.19
CD28P10747 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.87□□□□□ -0.19
CD28P10747 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.87□□□□□ -0.19
CD28P10747 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.87□□□□□ -0.19
CD28P10747 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.87□□□□□ -0.19
CD28P10747 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.87□□□□□ -0.19
CD28P10747 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms