Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTPRFP10586 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.2■□□□□ 0.82
PTPRFP10586 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPRFP10586 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 AC005498.2-205ENST00000593218 784 ntBASIC20.2■□□□□ 0.82
PTPRFP10586 AC009093.7-201ENST00000623853 1223 ntBASIC20.2■□□□□ 0.82
PTPRFP10586 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPRFP10586 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPRFP10586 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTPRFP10586 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPRFP10586 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 AC006116.8-202ENST00000587620 1550 ntBASIC20.2■□□□□ 0.82
PTPRFP10586 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 IGHV3-52-201ENST00000519770 353 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 AC096734.2-201ENST00000562054 433 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPRFP10586 AC023141.13-201ENST00000604991 943 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 AC106028.4-201ENST00000614509 607 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPRFP10586 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPRFP10586 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPRFP10586 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPRFP10586 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPRFP10586 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PTPRFP10586 AC092919.2-201ENST00000623631 1645 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPRFP10586 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPRFP10586 AL513210.1-201ENST00000629608 234 ntBASIC20.19■□□□□ 0.82
PTPRFP10586 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPRFP10586 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPRFP10586 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPRFP10586 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPRFP10586 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPRFP10586 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPRFP10586 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPRFP10586 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPRFP10586 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPRFP10586 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTPRFP10586 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPRFP10586 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.17■□□□□ 0.82
PTPRFP10586 AC002558.1-201ENST00000488906 803 ntBASIC20.17■□□□□ 0.82
PTPRFP10586 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPRFP10586 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPRFP10586 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 PTCHD3P3-201ENST00000403073 906 ntBASIC20.17■□□□□ 0.82
PTPRFP10586 LINC00982-205ENST00000420957 435 ntBASIC20.17■□□□□ 0.82
PTPRFP10586 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPRFP10586 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPRFP10586 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 AL096865.1-201ENST00000606796 927 ntBASIC20.17■□□□□ 0.82
PTPRFP10586 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTPRFP10586 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPRFP10586 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPRFP10586 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPRFP10586 AC025580.3-201ENST00000617932 1424 ntBASIC20.17■□□□□ 0.82
PTPRFP10586 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPRFP10586 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPRFP10586 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPRFP10586 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.16■□□□□ 0.82
PTPRFP10586 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPRFP10586 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPRFP10586 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPRFP10586 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PTPRFP10586 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPRFP10586 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PTPRFP10586 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms