Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.66■□□□□ 0.58
RARAP10276 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RARAP10276 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.66■□□□□ 0.58
RARAP10276 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.66■□□□□ 0.58
RARAP10276 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.66■□□□□ 0.58
RARAP10276 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.66■□□□□ 0.58
RARAP10276 AC083849.1-201ENST00000615227 514 ntBASIC18.66■□□□□ 0.58
RARAP10276 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.66■□□□□ 0.58
RARAP10276 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.66■□□□□ 0.58
RARAP10276 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RARAP10276 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.66■□□□□ 0.58
RARAP10276 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.65■□□□□ 0.58
RARAP10276 AL138688.1-201ENST00000624851 1594 ntBASIC18.65■□□□□ 0.58
RARAP10276 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.65■□□□□ 0.58
RARAP10276 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.65■□□□□ 0.58
RARAP10276 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RARAP10276 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RARAP10276 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 AL353692.3-201ENST00000407031 1396 ntBASIC18.65■□□□□ 0.58
RARAP10276 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
RARAP10276 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RARAP10276 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RARAP10276 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.58
RARAP10276 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.64■□□□□ 0.58
RARAP10276 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RARAP10276 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RARAP10276 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
RARAP10276 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 CROCCP2-202ENST00000412962 2773 ntBASIC18.64■□□□□ 0.57
RARAP10276 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 TSPY12P-201ENST00000421279 868 ntBASIC18.64■□□□□ 0.57
RARAP10276 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.64■□□□□ 0.57
RARAP10276 RNF126P1-202ENST00000569893 925 ntBASIC18.64■□□□□ 0.57
RARAP10276 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 AC005332.3-201ENST00000589904 676 ntBASIC18.64■□□□□ 0.57
RARAP10276 GPR32P1-201ENST00000601788 811 ntBASIC18.64■□□□□ 0.57
RARAP10276 AC009154.2-201ENST00000621177 724 ntBASIC18.64■□□□□ 0.57
RARAP10276 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 LINC00304-203ENST00000565008 1864 ntBASIC18.64■□□□□ 0.57
RARAP10276 KRT8P47-201ENST00000604727 1398 ntBASIC18.64■□□□□ 0.57
RARAP10276 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RARAP10276 BCL2-203ENST00000589955 5011 ntBASIC18.64■□□□□ 0.57
RARAP10276 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.64■□□□□ 0.57
RARAP10276 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.64■□□□□ 0.57
RARAP10276 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
RARAP10276 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RARAP10276 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RARAP10276 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RARAP10276 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
RARAP10276 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RARAP10276 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
RARAP10276 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.63■□□□□ 0.57
RARAP10276 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.63■□□□□ 0.57
RARAP10276 KRT18P21-201ENST00000515767 1272 ntBASIC18.63■□□□□ 0.57
RARAP10276 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.63■□□□□ 0.57
RARAP10276 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.63■□□□□ 0.57
RARAP10276 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.63■□□□□ 0.57
RARAP10276 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RARAP10276 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms