Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.37■□□□□ 0.37
SP9P0CG40 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SP9P0CG40 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SP9P0CG40 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.37■□□□□ 0.37
SP9P0CG40 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.37■□□□□ 0.37
SP9P0CG40 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SP9P0CG40 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SP9P0CG40 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.37■□□□□ 0.37
SP9P0CG40 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SP9P0CG40 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.36■□□□□ 0.37
SP9P0CG40 AL512638.1-201ENST00000457493 794 ntBASIC17.36■□□□□ 0.37
SP9P0CG40 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 AC079140.1-201ENST00000508039 487 ntBASIC17.36■□□□□ 0.37
SP9P0CG40 IGHV3-42-201ENST00000520410 361 ntBASIC17.36■□□□□ 0.37
SP9P0CG40 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.36■□□□□ 0.37
SP9P0CG40 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.36■□□□□ 0.37
SP9P0CG40 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.36■□□□□ 0.37
SP9P0CG40 AL390754.1-201ENST00000619088 582 ntBASIC17.36■□□□□ 0.37
SP9P0CG40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SP9P0CG40 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
SP9P0CG40 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SP9P0CG40 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
SP9P0CG40 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.36■□□□□ 0.37
SP9P0CG40 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SP9P0CG40 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SP9P0CG40 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SP9P0CG40 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SP9P0CG40 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.35■□□□□ 0.37
SP9P0CG40 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.35■□□□□ 0.37
SP9P0CG40 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.35■□□□□ 0.37
SP9P0CG40 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.35■□□□□ 0.37
SP9P0CG40 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.35■□□□□ 0.37
SP9P0CG40 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SP9P0CG40 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SP9P0CG40 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.35■□□□□ 0.37
SP9P0CG40 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.35■□□□□ 0.37
SP9P0CG40 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SP9P0CG40 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP9P0CG40 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 PCDHAC2-203ENST00000615316 3011 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.34■□□□□ 0.37
SP9P0CG40 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 ESPNP-201ENST00000270691 2015 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.34■□□□□ 0.37
SP9P0CG40 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SP9P0CG40 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.34■□□□□ 0.37
SP9P0CG40 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.34■□□□□ 0.37
SP9P0CG40 GPS2P2-201ENST00000430745 888 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 RBPMS2P1-201ENST00000437762 623 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.34■□□□□ 0.37
SP9P0CG40 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SP9P0CG40 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.34■□□□□ 0.37
SP9P0CG40 AC093484.2-201ENST00000580996 2166 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 AC009336.1-201ENST00000608941 1553 ntBASIC17.34■□□□□ 0.37
SP9P0CG40 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
SP9P0CG40 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP9P0CG40 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SP9P0CG40 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SP9P0CG40 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SP9P0CG40 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.33■□□□□ 0.37
SP9P0CG40 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SP9P0CG40 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SP9P0CG40 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SP9P0CG40 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms