Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 AP005901.3-202ENST00000581653 237 ntBASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 AL591684.3-201ENST00000605187 298 ntBASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNYL3P0C7X3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNYL3P0C7X3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 AC012313.1-201ENST00000593393 3059 ntBASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 AC091607.1-201ENST00000490318 1060 ntBASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 MIR5100-201ENST00000579544 119 ntBASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCNYL3P0C7X3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 AC096582.2-201ENST00000510860 516 ntBASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 AC106795.1-205ENST00000512851 1056 ntBASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL3P0C7X3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms