Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SART3-203ENST00000546611 1184 ntBASIC16.12■□□□□ 0.17
FREM3P0C091 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.12■□□□□ 0.17
FREM3P0C091 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FREM3P0C091 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.12■□□□□ 0.17
FREM3P0C091 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FREM3P0C091 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 AC026396.1-201ENST00000419388 421 ntBASIC16.12■□□□□ 0.17
FREM3P0C091 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.12■□□□□ 0.17
FREM3P0C091 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.12■□□□□ 0.17
FREM3P0C091 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
FREM3P0C091 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.12■□□□□ 0.17
FREM3P0C091 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.11■□□□□ 0.17
FREM3P0C091 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 AC091304.2-201ENST00000564639 760 ntBASIC16.11■□□□□ 0.17
FREM3P0C091 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.11■□□□□ 0.17
FREM3P0C091 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FREM3P0C091 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FREM3P0C091 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 FAM197Y8-203ENST00000450145 560 ntBASIC16.1■□□□□ 0.17
FREM3P0C091 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.1■□□□□ 0.17
FREM3P0C091 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.1■□□□□ 0.17
FREM3P0C091 AL121772.3-201ENST00000610840 674 ntBASIC16.1■□□□□ 0.17
FREM3P0C091 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
FREM3P0C091 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.1■□□□□ 0.17
FREM3P0C091 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
FREM3P0C091 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.1■□□□□ 0.17
FREM3P0C091 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 AC148477.8-201ENST00000624298 468 ntBASIC16.1■□□□□ 0.17
FREM3P0C091 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.1■□□□□ 0.17
FREM3P0C091 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FREM3P0C091 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms