Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RNF165-205ENST00000588679 2904 ntBASIC19.92■□□□□ 0.78
CYP3A4P08684 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 MRPL3P1-201ENST00000400109 1033 ntBASIC19.92■□□□□ 0.78
CYP3A4P08684 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 AC018712.1-201ENST00000455767 687 ntBASIC19.92■□□□□ 0.78
CYP3A4P08684 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.92■□□□□ 0.78
CYP3A4P08684 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.92■□□□□ 0.78
CYP3A4P08684 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.92■□□□□ 0.78
CYP3A4P08684 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYP3A4P08684 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 AL020989.1-201ENST00000422979 469 ntBASIC19.91■□□□□ 0.78
CYP3A4P08684 KRT18P67-201ENST00000432816 1264 ntBASIC19.91■□□□□ 0.78
CYP3A4P08684 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.91■□□□□ 0.78
CYP3A4P08684 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CYP3A4P08684 AC021087.4-201ENST00000563761 564 ntBASIC19.91■□□□□ 0.78
CYP3A4P08684 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.91■□□□□ 0.78
CYP3A4P08684 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 NOC2LP2-201ENST00000407594 1944 ntBASIC19.91■□□□□ 0.78
CYP3A4P08684 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
CYP3A4P08684 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.91■□□□□ 0.78
CYP3A4P08684 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CYP3A4P08684 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYP3A4P08684 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CYP3A4P08684 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CYP3A4P08684 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CYP3A4P08684 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CYP3A4P08684 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.9■□□□□ 0.78
CYP3A4P08684 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.9■□□□□ 0.78
CYP3A4P08684 RNPS1P1-201ENST00000507437 918 ntBASIC19.9■□□□□ 0.78
CYP3A4P08684 RNA5SP419-201ENST00000515908 135 ntBASIC19.9■□□□□ 0.78
CYP3A4P08684 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.9■□□□□ 0.78
CYP3A4P08684 AL662844.1-201ENST00000546340 181 ntBASIC19.9■□□□□ 0.78
CYP3A4P08684 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.9■□□□□ 0.78
CYP3A4P08684 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.9■□□□□ 0.78
CYP3A4P08684 AC064862.7-201ENST00000604520 867 ntBASIC19.9■□□□□ 0.78
CYP3A4P08684 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 HLA-J-201ENST00000462773 1622 ntBASIC19.9■□□□□ 0.78
CYP3A4P08684 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.9■□□□□ 0.78
CYP3A4P08684 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CYP3A4P08684 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CYP3A4P08684 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYP3A4P08684 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CYP3A4P08684 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CYP3A4P08684 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms