Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 Z69720.1-201ENST00000601483 472 ntBASIC18.01■□□□□ 0.47
HLA-DQB2P05538 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB2P05538 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB2P05538 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
HLA-DQB2P05538 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 LETM1P2-201ENST00000597330 2178 ntBASIC18■□□□□ 0.47
HLA-DQB2P05538 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DQB2P05538 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 KRT17P6-201ENST00000453795 1220 ntBASIC18■□□□□ 0.47
HLA-DQB2P05538 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB2P05538 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB2P05538 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HLA-DQB2P05538 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18■□□□□ 0.47
HLA-DQB2P05538 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB2P05538 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 HLA-J-201ENST00000462773 1622 ntBASIC18■□□□□ 0.47
HLA-DQB2P05538 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HLA-DQB2P05538 BCL2-203ENST00000589955 5011 ntBASIC18■□□□□ 0.47
HLA-DQB2P05538 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB2P05538 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 COX5BP2-201ENST00000392354 334 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AP000867.3-201ENST00000524675 377 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AC074051.2-201ENST00000565115 352 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AC092329.2-201ENST00000598402 547 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 HCG11-201ENST00000411553 5696 ntBASIC17.99■□□□□ 0.47
HLA-DQB2P05538 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB2P05538 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 NSUN5P1-202ENST00000421140 1535 ntBASIC17.98■□□□□ 0.47
HLA-DQB2P05538 NSUN5P2-203ENST00000457352 1529 ntBASIC17.98■□□□□ 0.47
HLA-DQB2P05538 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DQB2P05538 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms