Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.38■□□□□ 0.37
WNT1P04628 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
WNT1P04628 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
WNT1P04628 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
WNT1P04628 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
WNT1P04628 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
WNT1P04628 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 AC120498.9-201ENST00000339021 3867 ntBASIC17.37■□□□□ 0.37
WNT1P04628 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
WNT1P04628 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
WNT1P04628 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
WNT1P04628 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.37■□□□□ 0.37
WNT1P04628 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.37■□□□□ 0.37
WNT1P04628 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.37■□□□□ 0.37
WNT1P04628 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 DNAJB3-201ENST00000446806 729 ntBASIC17.37■□□□□ 0.37
WNT1P04628 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.37■□□□□ 0.37
WNT1P04628 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 MIR3687-2-201ENST00000577708 61 ntBASIC17.37■□□□□ 0.37
WNT1P04628 AP001160.2-201ENST00000596071 487 ntBASIC17.37■□□□□ 0.37
WNT1P04628 AC019129.2-201ENST00000609837 1235 ntBASIC17.37■□□□□ 0.37
WNT1P04628 MIR3687-1-201ENST00000614492 61 ntBASIC17.37■□□□□ 0.37
WNT1P04628 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
WNT1P04628 AC093677.2-201ENST00000600169 1863 ntBASIC17.37■□□□□ 0.37
WNT1P04628 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT1P04628 AC100803.2-201ENST00000562459 1963 ntBASIC17.37■□□□□ 0.37
WNT1P04628 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
WNT1P04628 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.36■□□□□ 0.37
WNT1P04628 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 AC002347.1-201ENST00000569543 541 ntBASIC17.36■□□□□ 0.37
WNT1P04628 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT1P04628 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT1P04628 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT1P04628 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT1P04628 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT1P04628 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.36■□□□□ 0.37
WNT1P04628 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT1P04628 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT1P04628 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT1P04628 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.35■□□□□ 0.37
WNT1P04628 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
WNT1P04628 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT1P04628 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT1P04628 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
WNT1P04628 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.35■□□□□ 0.37
WNT1P04628 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
WNT1P04628 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms