Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.09□□□□□ -0.15
IFNA1P01562 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
IFNA1P01562 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.15
IFNA1P01562 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
IFNA1P01562 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IFNA1P01562 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.08□□□□□ -0.15
IFNA1P01562 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
IFNA1P01562 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.08□□□□□ -0.15
IFNA1P01562 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IFNA1P01562 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IFNA1P01562 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.08□□□□□ -0.16
IFNA1P01562 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 AC093787.1-201ENST00000450396 207 ntBASIC14.08□□□□□ -0.16
IFNA1P01562 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.08□□□□□ -0.16
IFNA1P01562 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 AC137761.2-201ENST00000561729 223 ntBASIC14.08□□□□□ -0.16
IFNA1P01562 AC145350.3-201ENST00000569033 163 ntBASIC14.08□□□□□ -0.16
IFNA1P01562 AC231657.2-201ENST00000624556 255 ntBASIC14.08□□□□□ -0.16
IFNA1P01562 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.08□□□□□ -0.16
IFNA1P01562 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IFNA1P01562 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
IFNA1P01562 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IFNA1P01562 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.07□□□□□ -0.16
IFNA1P01562 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
IFNA1P01562 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 AC007322.1-201ENST00000426983 750 ntBASIC14.07□□□□□ -0.16
IFNA1P01562 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.07□□□□□ -0.16
IFNA1P01562 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.07□□□□□ -0.16
IFNA1P01562 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 AC097376.2-205ENST00000610159 5334 ntBASIC14.07□□□□□ -0.16
IFNA1P01562 OR2I1P-209ENST00000641730 5365 ntBASIC14.07□□□□□ -0.16
IFNA1P01562 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
IFNA1P01562 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.07□□□□□ -0.16
IFNA1P01562 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.07□□□□□ -0.16
IFNA1P01562 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.07□□□□□ -0.16
IFNA1P01562 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IFNA1P01562 KRT8P11-201ENST00000409686 1436 ntBASIC14.07□□□□□ -0.16
IFNA1P01562 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
IFNA1P01562 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 AC008741.2-201ENST00000612792 3115 ntBASIC14.06□□□□□ -0.16
IFNA1P01562 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
IFNA1P01562 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms