Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LTAP01374 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.39□□□□□ -0.27
LTAP01374 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.39□□□□□ -0.27
LTAP01374 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.39□□□□□ -0.27
LTAP01374 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.39□□□□□ -0.27
LTAP01374 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.39□□□□□ -0.27
LTAP01374 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 AC112497.1-201ENST00000624824 639 ntBASIC13.39□□□□□ -0.27
LTAP01374 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.39□□□□□ -0.27
LTAP01374 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.39□□□□□ -0.27
LTAP01374 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LTAP01374 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.39□□□□□ -0.27
LTAP01374 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.39□□□□□ -0.27
LTAP01374 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LTAP01374 LINC00167-201ENST00000530583 1419 ntBASIC13.39□□□□□ -0.27
LTAP01374 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 AL603756.1-201ENST00000606511 2163 ntBASIC13.38□□□□□ -0.27
LTAP01374 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LTAP01374 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.38□□□□□ -0.27
LTAP01374 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.38□□□□□ -0.27
LTAP01374 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.38□□□□□ -0.27
LTAP01374 CR769767.2-201ENST00000622735 460 ntBASIC13.38□□□□□ -0.27
LTAP01374 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LTAP01374 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 CROCCP1-201ENST00000426910 5675 ntBASIC13.38□□□□□ -0.27
LTAP01374 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.38□□□□□ -0.27
LTAP01374 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.38□□□□□ -0.27
LTAP01374 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.38□□□□□ -0.27
LTAP01374 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LTAP01374 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LTAP01374 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.37□□□□□ -0.27
LTAP01374 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LTAP01374 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LTAP01374 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms