Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMC2O95347 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMC2O95347 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMC2O95347 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMC2O95347 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMC2O95347 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMC2O95347 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMC2O95347 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.1■□□□□ 0.81
SMC2O95347 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
SMC2O95347 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 AC113404.2-201ENST00000507884 177 ntBASIC20.1■□□□□ 0.81
SMC2O95347 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.1■□□□□ 0.81
SMC2O95347 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.1■□□□□ 0.81
SMC2O95347 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
SMC2O95347 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMC2O95347 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMC2O95347 AC133963.1-201ENST00000504166 1679 ntBASIC20.1■□□□□ 0.81
SMC2O95347 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SMC2O95347 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SMC2O95347 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.09■□□□□ 0.81
SMC2O95347 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 AC034232.1-201ENST00000506026 1064 ntBASIC20.09■□□□□ 0.81
SMC2O95347 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.09■□□□□ 0.81
SMC2O95347 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 AC124067.4-201ENST00000519691 2379 ntBASIC20.09■□□□□ 0.81
SMC2O95347 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.09■□□□□ 0.81
SMC2O95347 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SMC2O95347 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMC2O95347 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
SMC2O95347 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.08■□□□□ 0.81
SMC2O95347 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SMC2O95347 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.08■□□□□ 0.81
SMC2O95347 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.08■□□□□ 0.81
SMC2O95347 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.08■□□□□ 0.81
SMC2O95347 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMC2O95347 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.08■□□□□ 0.81
SMC2O95347 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.08■□□□□ 0.81
SMC2O95347 AC141257.4-201ENST00000634557 245 ntBASIC20.08■□□□□ 0.81
SMC2O95347 AC136944.6-201ENST00000634818 245 ntBASIC20.08■□□□□ 0.81
SMC2O95347 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SMC2O95347 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMC2O95347 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SMC2O95347 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMC2O95347 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMC2O95347 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMC2O95347 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms