Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18■□□□□ 0.47
USP1O94782 AL138688.1-201ENST00000624851 1594 ntBASIC18■□□□□ 0.47
USP1O94782 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
USP1O94782 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 HLA-F-220ENST00000434407 884 ntBASIC18■□□□□ 0.47
USP1O94782 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18■□□□□ 0.47
USP1O94782 RN7SL850P-201ENST00000579959 291 ntBASIC18■□□□□ 0.47
USP1O94782 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 LINC00304-203ENST00000565008 1864 ntBASIC18■□□□□ 0.47
USP1O94782 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18■□□□□ 0.47
USP1O94782 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
USP1O94782 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18■□□□□ 0.47
USP1O94782 AC141586.5-201ENST00000624546 2050 ntBASIC18■□□□□ 0.47
USP1O94782 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USP1O94782 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18■□□□□ 0.47
USP1O94782 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
USP1O94782 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18■□□□□ 0.47
USP1O94782 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
USP1O94782 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.99■□□□□ 0.47
USP1O94782 STARP1-201ENST00000397973 869 ntBASIC17.99■□□□□ 0.47
USP1O94782 SPDYE15P-201ENST00000424157 909 ntBASIC17.99■□□□□ 0.47
USP1O94782 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
USP1O94782 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.99■□□□□ 0.47
USP1O94782 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 AC009949.1-201ENST00000623048 1830 ntBASIC17.99■□□□□ 0.47
USP1O94782 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
USP1O94782 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP1O94782 AC108860.2-201ENST00000562760 2183 ntBASIC17.98■□□□□ 0.47
USP1O94782 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.98■□□□□ 0.47
USP1O94782 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
USP1O94782 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
USP1O94782 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.98■□□□□ 0.47
USP1O94782 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP1O94782 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP1O94782 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.98■□□□□ 0.47
USP1O94782 DDX43P3-201ENST00000441064 443 ntBASIC17.98■□□□□ 0.47
USP1O94782 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP1O94782 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.98■□□□□ 0.47
USP1O94782 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
USP1O94782 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP1O94782 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 AC008894.3-201ENST00000624324 3103 ntBASIC17.98■□□□□ 0.47
USP1O94782 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 HLA-J-201ENST00000462773 1622 ntBASIC17.98■□□□□ 0.47
USP1O94782 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP1O94782 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP1O94782 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms