Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GPC4O75487 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.83■□□□□ 0.44
GPC4O75487 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
GPC4O75487 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 AC012313.1-201ENST00000593393 3059 ntBASIC17.82■□□□□ 0.44
GPC4O75487 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 AL031133.1-201ENST00000406807 723 ntBASIC17.82■□□□□ 0.44
GPC4O75487 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC4O75487 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC4O75487 VENTXP5-201ENST00000523979 775 ntBASIC17.82■□□□□ 0.44
GPC4O75487 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC4O75487 ZNF444P1-201ENST00000559497 298 ntBASIC17.82■□□□□ 0.44
GPC4O75487 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
GPC4O75487 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC4O75487 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC4O75487 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GPC4O75487 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.81■□□□□ 0.44
GPC4O75487 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.81■□□□□ 0.44
GPC4O75487 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 KRT18P48-201ENST00000434763 852 ntBASIC17.81■□□□□ 0.44
GPC4O75487 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
GPC4O75487 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GPC4O75487 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC4O75487 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC4O75487 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
GPC4O75487 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC4O75487 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC4O75487 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GPC4O75487 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GPC4O75487 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GPC4O75487 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC4O75487 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms