Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.48■□□□□ 0.55
LRCH4O75427 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LRCH4O75427 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRCH4O75427 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.48■□□□□ 0.55
LRCH4O75427 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH4O75427 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.48■□□□□ 0.55
LRCH4O75427 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 CROCCP2-202ENST00000412962 2773 ntBASIC18.47■□□□□ 0.55
LRCH4O75427 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.47■□□□□ 0.55
LRCH4O75427 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.47■□□□□ 0.55
LRCH4O75427 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.47■□□□□ 0.55
LRCH4O75427 AC005336.2-201ENST00000593183 939 ntBASIC18.47■□□□□ 0.55
LRCH4O75427 IGHV3-41-201ENST00000613121 348 ntBASIC18.47■□□□□ 0.55
LRCH4O75427 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH4O75427 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRCH4O75427 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.47■□□□□ 0.55
LRCH4O75427 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH4O75427 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH4O75427 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRCH4O75427 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH4O75427 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRCH4O75427 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 AC016734.2-201ENST00000624325 1377 ntBASIC18.46■□□□□ 0.55
LRCH4O75427 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH4O75427 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRCH4O75427 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 AC087388.1-201ENST00000571370 1112 ntBASIC18.46■□□□□ 0.55
LRCH4O75427 AL121672.3-201ENST00000608644 468 ntBASIC18.46■□□□□ 0.55
LRCH4O75427 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH4O75427 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 AC125634.1-201ENST00000438758 1403 ntBASIC18.46■□□□□ 0.55
LRCH4O75427 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.46■□□□□ 0.55
LRCH4O75427 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.46■□□□□ 0.55
LRCH4O75427 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRCH4O75427 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LRCH4O75427 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRCH4O75427 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH4O75427 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 PCED1CP-201ENST00000419887 785 ntBASIC18.45■□□□□ 0.54
LRCH4O75427 CHCHD2P8-201ENST00000429873 447 ntBASIC18.45■□□□□ 0.54
LRCH4O75427 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH4O75427 BX276092.5-203ENST00000456199 560 ntBASIC18.45■□□□□ 0.54
LRCH4O75427 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.45■□□□□ 0.54
LRCH4O75427 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH4O75427 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms