Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
CPNE3O75131 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.06■□□□□ 0.32
CPNE3O75131 AF238378.1-201ENST00000526806 358 ntBASIC17.06■□□□□ 0.32
CPNE3O75131 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.06■□□□□ 0.32
CPNE3O75131 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CPNE3O75131 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CPNE3O75131 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE3O75131 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE3O75131 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.05■□□□□ 0.32
CPNE3O75131 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE3O75131 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE3O75131 RCN1P2-201ENST00000398357 915 ntBASIC17.05■□□□□ 0.32
CPNE3O75131 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE3O75131 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.05■□□□□ 0.32
CPNE3O75131 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.05■□□□□ 0.32
CPNE3O75131 AL138831.2-201ENST00000606564 490 ntBASIC17.05■□□□□ 0.32
CPNE3O75131 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.05■□□□□ 0.32
CPNE3O75131 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE3O75131 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
CPNE3O75131 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE3O75131 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE3O75131 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE3O75131 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE3O75131 AC009113.1-201ENST00000570267 2443 ntBASIC17.04■□□□□ 0.32
CPNE3O75131 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE3O75131 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.04■□□□□ 0.32
CPNE3O75131 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE3O75131 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE3O75131 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE3O75131 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.04■□□□□ 0.32
CPNE3O75131 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPNE3O75131 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CPNE3O75131 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE3O75131 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CPNE3O75131 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE3O75131 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE3O75131 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms