Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXD2O60548 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXD2O60548 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FOXD2O60548 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.87■□□□□ 0.45
FOXD2O60548 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 UNC93B6-202ENST00000528242 690 ntBASIC17.87■□□□□ 0.45
FOXD2O60548 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXD2O60548 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXD2O60548 AC011467.4-201ENST00000594891 528 ntBASIC17.87■□□□□ 0.45
FOXD2O60548 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXD2O60548 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
FOXD2O60548 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXD2O60548 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
FOXD2O60548 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXD2O60548 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXD2O60548 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXD2O60548 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
FOXD2O60548 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXD2O60548 AC239800.4-201ENST00000603712 296 ntBASIC17.86■□□□□ 0.45
FOXD2O60548 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXD2O60548 AC107918.4-202ENST00000641623 219 ntBASIC17.86■□□□□ 0.45
FOXD2O60548 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
FOXD2O60548 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXD2O60548 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXD2O60548 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXD2O60548 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
FOXD2O60548 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 MCCD1P2-201ENST00000423228 335 ntBASIC17.85■□□□□ 0.45
FOXD2O60548 LAGE3P1-201ENST00000425356 484 ntBASIC17.85■□□□□ 0.45
FOXD2O60548 AL645939.2-201ENST00000427340 991 ntBASIC17.85■□□□□ 0.45
FOXD2O60548 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXD2O60548 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXD2O60548 AC005336.2-201ENST00000593183 939 ntBASIC17.85■□□□□ 0.45
FOXD2O60548 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXD2O60548 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXD2O60548 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXD2O60548 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
FOXD2O60548 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXD2O60548 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.84■□□□□ 0.45
FOXD2O60548 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXD2O60548 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXD2O60548 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXD2O60548 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms