Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIN3BO60391 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIN3BO60391 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.49■■□□□ 1.03
GRIN3BO60391 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIN3BO60391 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.49■■□□□ 1.03
GRIN3BO60391 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.49■■□□□ 1.03
GRIN3BO60391 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.49■■□□□ 1.03
GRIN3BO60391 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 AC099522.2-201ENST00000607001 744 ntBASIC21.49■■□□□ 1.03
GRIN3BO60391 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GRIN3BO60391 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GRIN3BO60391 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
GRIN3BO60391 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
GRIN3BO60391 PI4KAP1-204ENST00000612579 1703 ntBASIC21.49■■□□□ 1.03
GRIN3BO60391 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIN3BO60391 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIN3BO60391 AL049757.1-201ENST00000616842 1596 ntBASIC21.48■■□□□ 1.03
GRIN3BO60391 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.48■■□□□ 1.03
GRIN3BO60391 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.48■■□□□ 1.03
GRIN3BO60391 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.48■■□□□ 1.03
GRIN3BO60391 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.48■■□□□ 1.03
GRIN3BO60391 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GRIN3BO60391 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
GRIN3BO60391 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIN3BO60391 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIN3BO60391 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GRIN3BO60391 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIN3BO60391 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 SIRPAP1-201ENST00000448467 1770 ntBASIC21.47■■□□□ 1.03
GRIN3BO60391 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.47■■□□□ 1.03
GRIN3BO60391 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.47■■□□□ 1.03
GRIN3BO60391 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.47■■□□□ 1.03
GRIN3BO60391 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.47■■□□□ 1.03
GRIN3BO60391 AC243562.1-201ENST00000560672 389 ntBASIC21.47■■□□□ 1.03
GRIN3BO60391 AC026150.2-201ENST00000564693 1156 ntBASIC21.47■■□□□ 1.03
GRIN3BO60391 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.47■■□□□ 1.03
GRIN3BO60391 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.47■■□□□ 1.03
GRIN3BO60391 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIN3BO60391 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIN3BO60391 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIN3BO60391 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIN3BO60391 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
GRIN3BO60391 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.46■■□□□ 1.03
GRIN3BO60391 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
GRIN3BO60391 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.46■■□□□ 1.03
GRIN3BO60391 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
GRIN3BO60391 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.46■■□□□ 1.03
GRIN3BO60391 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.46■■□□□ 1.03
GRIN3BO60391 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GRIN3BO60391 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
GRIN3BO60391 AC004890.2-204ENST00000481968 304 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms