Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18■□□□□ 0.47
KDELR3O43731 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 AC019129.2-201ENST00000609837 1235 ntBASIC18■□□□□ 0.47
KDELR3O43731 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KDELR3O43731 LINC01451-201ENST00000623792 534 ntBASIC18■□□□□ 0.47
KDELR3O43731 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
KDELR3O43731 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 AL049757.1-201ENST00000616842 1596 ntBASIC18■□□□□ 0.47
KDELR3O43731 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.99■□□□□ 0.47
KDELR3O43731 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.99■□□□□ 0.47
KDELR3O43731 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
KDELR3O43731 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.99■□□□□ 0.47
KDELR3O43731 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.99■□□□□ 0.47
KDELR3O43731 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
KDELR3O43731 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 REXO1L6P-202ENST00000619970 1078 ntBASIC17.99■□□□□ 0.47
KDELR3O43731 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
KDELR3O43731 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.99■□□□□ 0.47
KDELR3O43731 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
KDELR3O43731 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KDELR3O43731 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KDELR3O43731 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 AKR1C7P-201ENST00000305623 895 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
KDELR3O43731 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 EMBP1-201ENST00000458200 901 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 AC002558.1-201ENST00000488906 803 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.98■□□□□ 0.47
KDELR3O43731 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.98■□□□□ 0.47
KDELR3O43731 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.98■□□□□ 0.47
KDELR3O43731 AC109462.3-201ENST00000573934 613 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 RN7SL510P-201ENST00000581311 263 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 AL691432.3-201ENST00000621860 400 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 AP000867.4-201ENST00000641616 219 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.98■□□□□ 0.47
KDELR3O43731 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.98■□□□□ 0.47
KDELR3O43731 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 RNF165-205ENST00000588679 2904 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KDELR3O43731 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
KDELR3O43731 KRT8P10-201ENST00000450021 1447 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 AP005117.1-201ENST00000584346 1413 ntBASIC17.98■□□□□ 0.47
KDELR3O43731 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KDELR3O43731 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms