Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.65■□□□□ 0.26
RRP8O43159 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.65■□□□□ 0.26
RRP8O43159 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 MIR4745-201ENST00000577608 62 ntBASIC16.65■□□□□ 0.26
RRP8O43159 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RRP8O43159 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RRP8O43159 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RRP8O43159 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RRP8O43159 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
RRP8O43159 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RRP8O43159 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RRP8O43159 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.64■□□□□ 0.26
RRP8O43159 KRT8P47-201ENST00000604727 1398 ntBASIC16.64■□□□□ 0.26
RRP8O43159 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 AC004817.3-201ENST00000602957 2129 ntBASIC16.64■□□□□ 0.25
RRP8O43159 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RRP8O43159 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
RRP8O43159 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.64■□□□□ 0.25
RRP8O43159 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
RRP8O43159 AL031432.2-201ENST00000566714 459 ntBASIC16.64■□□□□ 0.25
RRP8O43159 AL928711.1-201ENST00000570165 459 ntBASIC16.64■□□□□ 0.25
RRP8O43159 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 AC004706.3-202ENST00000621574 984 ntBASIC16.64■□□□□ 0.25
RRP8O43159 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RRP8O43159 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RRP8O43159 AC063926.2-201ENST00000623766 1308 ntBASIC16.64■□□□□ 0.25
RRP8O43159 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RRP8O43159 MYLKP1-201ENST00000509077 1580 ntBASIC16.64■□□□□ 0.25
RRP8O43159 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RRP8O43159 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RRP8O43159 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
RRP8O43159 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RRP8O43159 SPDYE21P-201ENST00000413323 827 ntBASIC16.63■□□□□ 0.25
RRP8O43159 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.63■□□□□ 0.25
RRP8O43159 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RRP8O43159 RNA5SP421-201ENST00000516864 134 ntBASIC16.63■□□□□ 0.25
RRP8O43159 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RRP8O43159 PDPK2P-202ENST00000562415 1191 ntBASIC16.63■□□□□ 0.25
RRP8O43159 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RRP8O43159 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RRP8O43159 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RRP8O43159 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RRP8O43159 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms