Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RTCAO00442 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RTCAO00442 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RTCAO00442 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.96■□□□□ 0.31
RTCAO00442 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.96■□□□□ 0.31
RTCAO00442 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.96■□□□□ 0.31
RTCAO00442 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTCAO00442 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RTCAO00442 AC116407.2-201ENST00000613639 860 ntBASIC16.96■□□□□ 0.31
RTCAO00442 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.96■□□□□ 0.31
RTCAO00442 AP000550.4-202ENST00000639755 178 ntBASIC16.96■□□□□ 0.31
RTCAO00442 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTCAO00442 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTCAO00442 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
RTCAO00442 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.96■□□□□ 0.3
RTCAO00442 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.96■□□□□ 0.3
RTCAO00442 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTCAO00442 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.96■□□□□ 0.3
RTCAO00442 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.96■□□□□ 0.3
RTCAO00442 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
RTCAO00442 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTCAO00442 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTCAO00442 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.96■□□□□ 0.3
RTCAO00442 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RTCAO00442 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RTCAO00442 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RTCAO00442 CHCHD2P8-201ENST00000429873 447 ntBASIC16.95■□□□□ 0.3
RTCAO00442 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.95■□□□□ 0.3
RTCAO00442 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.95■□□□□ 0.3
RTCAO00442 AC090616.6-201ENST00000582640 721 ntBASIC16.95■□□□□ 0.3
RTCAO00442 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.95■□□□□ 0.3
RTCAO00442 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.95■□□□□ 0.3
RTCAO00442 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.95■□□□□ 0.3
RTCAO00442 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 AC106820.2-201ENST00000563775 3264 ntBASIC16.95■□□□□ 0.3
RTCAO00442 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTCAO00442 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 TSSC2-201ENST00000450217 709 ntBASIC16.94■□□□□ 0.3
RTCAO00442 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.94■□□□□ 0.3
RTCAO00442 AC091607.1-201ENST00000490318 1060 ntBASIC16.94■□□□□ 0.3
RTCAO00442 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
RTCAO00442 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.94■□□□□ 0.3
RTCAO00442 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTCAO00442 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RTCAO00442 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTCAO00442 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms