Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM1O00151 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDLIM1O00151 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM1O00151 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 AC099063.4-201ENST00000641099 1602 ntBASIC16.96■□□□□ 0.31
PDLIM1O00151 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDLIM1O00151 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM1O00151 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDLIM1O00151 AC008040.2-201ENST00000461049 708 ntBASIC16.96■□□□□ 0.31
PDLIM1O00151 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM1O00151 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PDLIM1O00151 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM1O00151 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PDLIM1O00151 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM1O00151 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM1O00151 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.96■□□□□ 0.3
PDLIM1O00151 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM1O00151 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.96■□□□□ 0.3
PDLIM1O00151 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PDLIM1O00151 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM1O00151 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.3
PDLIM1O00151 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.96■□□□□ 0.3
PDLIM1O00151 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM1O00151 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 AC004951.3-201ENST00000418645 1148 ntBASIC16.95■□□□□ 0.3
PDLIM1O00151 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.95■□□□□ 0.3
PDLIM1O00151 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.95■□□□□ 0.3
PDLIM1O00151 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM1O00151 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 DGCR10-201ENST00000609839 495 ntBASIC16.95■□□□□ 0.3
PDLIM1O00151 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM1O00151 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM1O00151 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM1O00151 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 AC023824.1-201ENST00000562945 2975 ntBASIC16.94■□□□□ 0.3
PDLIM1O00151 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM1O00151 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM1O00151 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM1O00151 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.94■□□□□ 0.3
PDLIM1O00151 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM1O00151 AC091390.4-202ENST00000476426 537 ntBASIC16.94■□□□□ 0.3
PDLIM1O00151 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms