Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX39AO00148 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 MRPL3P1-201ENST00000400109 1033 ntBASIC19.98■□□□□ 0.79
DDX39AO00148 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX39AO00148 FDX1P1-201ENST00000449115 551 ntBASIC19.98■□□□□ 0.79
DDX39AO00148 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX39AO00148 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX39AO00148 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.98■□□□□ 0.79
DDX39AO00148 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
DDX39AO00148 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX39AO00148 AL354751.1-201ENST00000412768 1863 ntBASIC19.98■□□□□ 0.79
DDX39AO00148 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX39AO00148 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX39AO00148 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
DDX39AO00148 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DDX39AO00148 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX39AO00148 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.97■□□□□ 0.79
DDX39AO00148 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DDX39AO00148 FLJ13224-201ENST00000313737 1514 ntBASIC19.97■□□□□ 0.79
DDX39AO00148 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX39AO00148 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 AC090340.1-201ENST00000620778 4980 ntBASIC19.97■□□□□ 0.79
DDX39AO00148 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.97■□□□□ 0.79
DDX39AO00148 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
DDX39AO00148 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX39AO00148 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.97■□□□□ 0.79
DDX39AO00148 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX39AO00148 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX39AO00148 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
DDX39AO00148 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX39AO00148 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.96■□□□□ 0.79
DDX39AO00148 ABCD1P5-201ENST00000445663 754 ntBASIC19.96■□□□□ 0.79
DDX39AO00148 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX39AO00148 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.96■□□□□ 0.79
DDX39AO00148 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.96■□□□□ 0.79
DDX39AO00148 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX39AO00148 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.96■□□□□ 0.79
DDX39AO00148 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX39AO00148 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX39AO00148 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX39AO00148 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX39AO00148 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX39AO00148 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX39AO00148 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX39AO00148 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms