Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C4orf47A7E2U8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AC138761.1-201ENST00000584393 385 ntBASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C4orf47A7E2U8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 KRT8P47-201ENST00000604727 1398 ntBASIC17.3■□□□□ 0.36
C4orf47A7E2U8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 AP000344.2-201ENST00000512987 629 ntBASIC17.3■□□□□ 0.36
C4orf47A7E2U8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
C4orf47A7E2U8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 IGHV3-65-201ENST00000523210 341 ntBASIC17.29■□□□□ 0.36
C4orf47A7E2U8 PDPK2P-202ENST00000562415 1191 ntBASIC17.29■□□□□ 0.36
C4orf47A7E2U8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AC004877.2-201ENST00000623941 599 ntBASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AC073592.5-201ENST00000624854 528 ntBASIC17.29■□□□□ 0.36
C4orf47A7E2U8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms