Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.19■□□□□ 0.66
USP27XA6NNY8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP27XA6NNY8 AC078925.2-201ENST00000624013 1973 ntBASIC19.19■□□□□ 0.66
USP27XA6NNY8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
USP27XA6NNY8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 AC133681.1-201ENST00000465482 601 ntBASIC19.18■□□□□ 0.66
USP27XA6NNY8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 AC110285.5-201ENST00000611501 352 ntBASIC19.18■□□□□ 0.66
USP27XA6NNY8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
USP27XA6NNY8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 AC103702.1-201ENST00000548801 2630 ntBASIC19.18■□□□□ 0.66
USP27XA6NNY8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP27XA6NNY8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 LINC00167-201ENST00000530583 1419 ntBASIC19.17■□□□□ 0.66
USP27XA6NNY8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.17■□□□□ 0.66
USP27XA6NNY8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP27XA6NNY8 AC096733.2-201ENST00000609937 1394 ntBASIC19.17■□□□□ 0.66
USP27XA6NNY8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP27XA6NNY8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 LYSMD4-203ENST00000378904 2122 ntBASIC19.16■□□□□ 0.66
USP27XA6NNY8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.16■□□□□ 0.66
USP27XA6NNY8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP27XA6NNY8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms