Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCCD1A6NED2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RCCD1A6NED2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 AC079602.3-201ENST00000623931 403 ntBASIC18.88■□□□□ 0.61
RCCD1A6NED2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 AC116353.5-201ENST00000638148 1699 ntBASIC18.88■□□□□ 0.61
RCCD1A6NED2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.88■□□□□ 0.61
RCCD1A6NED2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
RCCD1A6NED2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCCD1A6NED2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 MIR718-201ENST00000390190 70 ntBASIC18.87■□□□□ 0.61
RCCD1A6NED2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 AC128688.1-201ENST00000487626 519 ntBASIC18.87■□□□□ 0.61
RCCD1A6NED2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RCCD1A6NED2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCCD1A6NED2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 AC046185.3-201ENST00000623228 1824 ntBASIC18.86■□□□□ 0.61
RCCD1A6NED2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 GCSHP2-201ENST00000560971 527 ntBASIC18.86■□□□□ 0.61
RCCD1A6NED2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.86■□□□□ 0.61
RCCD1A6NED2 AC066615.1-201ENST00000640911 628 ntBASIC18.86■□□□□ 0.61
RCCD1A6NED2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCCD1A6NED2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms