Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 PGAM5P1-201ENST00000518923 814 ntBASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AC009336.1-201ENST00000608941 1553 ntBASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 KRT18P3-201ENST00000451602 1288 ntBASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AC139530.3-201ENST00000620344 690 ntBASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 AC087289.5-201ENST00000586076 3175 ntBASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L4A6NDZ8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 ELK2BP-201ENST00000415014 1224 ntBASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 BX842568.4-201ENST00000421222 227 ntBASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 AL139424.1-201ENST00000607572 797 ntBASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L4A6NDZ8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 AC138028.4-201ENST00000564984 1845 ntBASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L4A6NDZ8 AC009113.1-201ENST00000570267 2443 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms