Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 GCSHP5-201ENST00000443090 522 ntBASIC19.28■□□□□ 0.68
CCDC66A2RUB6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC66A2RUB6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 AP001412.1-201ENST00000608405 714 ntBASIC19.27■□□□□ 0.68
CCDC66A2RUB6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC66A2RUB6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 PHGDH-209ENST00000641074 1780 ntBASIC19.27■□□□□ 0.67
CCDC66A2RUB6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC66A2RUB6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 AL136379.1-201ENST00000623471 2642 ntBASIC19.26■□□□□ 0.67
CCDC66A2RUB6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 AC066615.1-201ENST00000640911 628 ntBASIC19.26■□□□□ 0.67
CCDC66A2RUB6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC66A2RUB6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 AL163051.1-201ENST00000569214 1512 ntBASIC19.25■□□□□ 0.67
CCDC66A2RUB6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC66A2RUB6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms