Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CR383656.2-201ENST00000548656 2254 ntBASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 AC079328.2-201ENST00000561241 3354 ntBASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 HEIH-201ENST00000623091 1652 ntBASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 AC015656.1-201ENST00000624209 3578 ntBASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
LINC01558Q9Y6Z2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC01558Q9Y6Z2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms