Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 AL353719.1-201ENST00000566847 864 ntBASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 AL023803.3-201ENST00000615559 522 ntBASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 AC010653.2-201ENST00000623505 997 ntBASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 AL357033.4-201ENST00000617703 1807 ntBASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 AC105020.1-201ENST00000435356 2205 ntBASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP4B1Q9Y6B7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 AC092338.2-201ENST00000568827 1415 ntBASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4B1Q9Y6B7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms