Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA5Q9Y5G8 AL158211.5-201ENST00000623583 2518 ntBASIC17.46■□□□□ 0.38
PCDHGA5Q9Y5G8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGA5Q9Y5G8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDHGA5Q9Y5G8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AC092474.2-201ENST00000424288 719 ntBASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AC004835.2-201ENST00000603762 682 ntBASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AC004790.2-201ENST00000623588 572 ntBASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 AC010460.3-201ENST00000511359 1579 ntBASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA5Q9Y5G8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 MRPL20P1-201ENST00000400819 433 ntBASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AC004449.1-201ENST00000564240 433 ntBASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AL032819.2-201ENST00000624543 2162 ntBASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA5Q9Y5G8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA5Q9Y5G8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms