Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SYNPO2Q9UMS6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SYNPO2Q9UMS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPO2Q9UMS6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPO2Q9UMS6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNPO2Q9UMS6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 AC009947.1-201ENST00000444350 727 ntBASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNPO2Q9UMS6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 PMS2P7-201ENST00000506558 1336 ntBASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 AC087289.5-201ENST00000586076 3175 ntBASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 GPR89P-201ENST00000407924 1495 ntBASIC20.37■□□□□ 0.85
SYNPO2Q9UMS6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 AC120498.9-201ENST00000339021 3867 ntBASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 ACTG1P4-201ENST00000425123 1122 ntBASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNPO2Q9UMS6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 AL354751.1-201ENST00000412768 1863 ntBASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYNPO2Q9UMS6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms