Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 UNC93B7-201ENST00000509439 705 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 AC138894.3-201ENST00000603787 634 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 AL732292.2-201ENST00000609649 430 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 BCL2-203ENST00000589955 5011 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF3C4Q9UKN8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF3C4Q9UKN8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF3C4Q9UKN8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF3C4Q9UKN8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 KRT18P65-201ENST00000439811 1286 ntBASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF3C4Q9UKN8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 MINOS1P3-201ENST00000457048 203 ntBASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 AL121772.3-201ENST00000610840 674 ntBASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF3C4Q9UKN8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 AC091304.2-201ENST00000564639 760 ntBASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF3C4Q9UKN8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms