Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 TSPY16P-201ENST00000449843 468 ntBASIC18.69■□□□□ 0.58
CHD7Q9P2D1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 PHGDH-209ENST00000641074 1780 ntBASIC18.69■□□□□ 0.58
CHD7Q9P2D1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 AC073130.3-201ENST00000624389 2278 ntBASIC18.69■□□□□ 0.58
CHD7Q9P2D1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD7Q9P2D1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 FAM207CP-201ENST00000443486 507 ntBASIC18.68■□□□□ 0.58
CHD7Q9P2D1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 AL512356.2-201ENST00000546955 174 ntBASIC18.68■□□□□ 0.58
CHD7Q9P2D1 REXO1L3P-201ENST00000622202 1288 ntBASIC18.68■□□□□ 0.58
CHD7Q9P2D1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD7Q9P2D1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 CRB3P1-201ENST00000449338 276 ntBASIC18.67■□□□□ 0.58
CHD7Q9P2D1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 TERF1P3-201ENST00000505638 1227 ntBASIC18.67■□□□□ 0.58
CHD7Q9P2D1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 AC025048.6-201ENST00000634326 1161 ntBASIC18.67■□□□□ 0.58
CHD7Q9P2D1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD7Q9P2D1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.66■□□□□ 0.58
CHD7Q9P2D1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 MRPS18AP1-201ENST00000414458 589 ntBASIC18.66■□□□□ 0.58
CHD7Q9P2D1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 AP001059.3-201ENST00000619053 235 ntBASIC18.66■□□□□ 0.58
CHD7Q9P2D1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD7Q9P2D1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms