Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.64■■□□□ 1.06
HMG20BQ9P0W2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.64■■□□□ 1.06
HMG20BQ9P0W2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
HMG20BQ9P0W2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 FGFR3P6-201ENST00000457012 610 ntBASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMG20BQ9P0W2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 FAM220CP-201ENST00000395253 831 ntBASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 ABCD1P5-201ENST00000445663 754 ntBASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 AP005117.1-201ENST00000584346 1413 ntBASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.63■■□□□ 1.05
HMG20BQ9P0W2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 RBM17P3-201ENST00000417687 1192 ntBASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 MTDHP3-201ENST00000594186 672 ntBASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 AL133373.2-201ENST00000623187 2828 ntBASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMG20BQ9P0W2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 FAM197Y8-203ENST00000450145 560 ntBASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMG20BQ9P0W2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms